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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
563
DNA binding
193
Transcription
25
DNA accessibility
7
DNA methylation
5
3D chromatin structure
1
DNA sequencing
Date released
20
May, 2022
2
August, 2017
2
October, 2019
1
February, 2021
Available data
31
bed narrowPeak
29
bigWig
11
bam
9
bigBed narrowPeak
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
4
fastq
1
bed bed3
1
tar
Organism
25
Homo sapiens
Biosample type
22
tissue
2
primary cell
1
cell line
Organ
166
pancreas
107
epithelium
85
kidney
47
blood vessel
47
heart
47
vasculature
45
artery
28
eye
24
liver
22
connective tissue
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
limb
6
adipose tissue
5
brain
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
1
vein
Project
25
AMP
Genome assembly (visualization)
24
hg19
3
GRCh38
Lab
20
Karen Mohlke, UNC
5
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
25 results
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ATAC-seq
DNase-seq
FAIRE-seq
tissue
liver
20
right lobe of liver
1
1
primary cell
Liver fetal (hepatocyte)
1
endothelial cell of umbilical vein
1
cell line
HepG2
1
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