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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
1
DNase-seq
Assay category
546
DNA binding
193
Transcription
23
DNA accessibility
7
DNA methylation
3
3D chromatin structure
1
DNA sequencing
Date released
20
May, 2022
2
August, 2017
1
October, 2019
Available data
28
bed narrowPeak
26
bigWig
8
bam
6
bigBed narrowPeak
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
fastq
bed bed3
Organism
23
Homo sapiens
Biosample type
22
tissue
1
primary cell
Organ
166
pancreas
107
epithelium
85
kidney
47
blood vessel
47
heart
47
vasculature
45
artery
28
eye
23
liver
16
connective tissue
10
lung
9
blood
9
bodily fluid
8
bone element
8
limb
8
skeleton
6
adipose tissue
4
brain
1
musculature of body
nerve
1
pituitary gland
1
skin of body
1
spleen
1
vein
Project
23
AMP
Genome assembly (visualization)
22
hg19
2
GRCh38
Lab
20
Karen Mohlke, UNC
3
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed bed3
bed bed3+
organ_slims!
nerve
BIOSAMPLE
ASSAY
23 results
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ATAC-seq
DNase-seq
tissue
liver
20
right lobe of liver
1
1
primary cell
Liver fetal (hepatocyte)
1
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