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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
21
ATAC-seq
Assay category
48
DNA accessibility
18
Transcription
6
DNA methylation
3
DNA binding
Date released
102
February, 2023
80
August, 2021
79
May, 2022
55
May, 2020
48
February, 2021
29
May, 2021
26
November, 2019
19
October, 2019
16
January, 2021
11
May, 2023
10
April, 2020
4
March, 2019
1
August, 2017
1
August, 2022
1
November, 2020
Available data
27
fastq
18
bam
18
bed narrowPeak
4
bed bedgraph
2
bed bed3
bigWig
Organism
48
Homo sapiens
Biosample type
27
primary cell
9
cell line
8
tissue
4
in vitro differentiated cells
Organ
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
6
limb
4
connective tissue
1
liver
Project
27
HPAP
21
AMP
Genome assembly (visualization)
21
hg19
17
GRCh38
Lab
27
Klaus Kaestner, Upenn
21
AMP-T2D consortium
Audit category:
27
audit script error
1
inconsistent replicate
files.file_type!
bigWig
organ_slims!
urinary bladder
BIOSAMPLE
ASSAY
48 results
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snATAC-seq
ATAC-seq
primary cell
Langerhans cell
27
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
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in vitro differentiated cells
adipocyte
4
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