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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
3
DNase-seq
Assay category
188
Transcription
100
DNA binding
25
DNA accessibility
4
DNA methylation
3
3D chromatin structure
1
DNA sequencing
Date released
20
May, 2022
2
June, 2019
1
August, 2017
1
February, 2021
1
October, 2019
Available data
28
bed narrowPeak
26
bigWig
8
bam
6
bigBed narrowPeak
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
fastq
1
bed bed3
Organism
25
Homo sapiens
Biosample type
21
tissue
3
primary cell
1
cell line
Organ
163
kidney
112
pancreas
91
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
35
musculature of body
34
brain
32
eye
30
connective tissue
25
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
5
adipose tissue
3
nerve
3
vein
pituitary gland
1
skin of body
Project
25
AMP
Genome assembly (visualization)
24
hg19
4
GRCh38
Lab
20
Karen Mohlke, UNC
5
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
files.file_type!
fastq
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
25 results
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ATAC-seq
DNase-seq
tissue
liver
20
right lobe of liver
1
primary cell
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
cell line
HepG2
1
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