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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ATAC-seq
5
DNase-seq
Assay category
193
Transcription
135
DNA binding
28
DNA accessibility
4
DNA methylation
3
3D chromatin structure
1
DNA sequencing
Date released
20
May, 2022
4
October, 2019
2
June, 2019
1
August, 2017
1
February, 2021
Available data
31
bed narrowPeak
29
bigWig
11
bam
8
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
fastq
1
bed bed3
Organism
28
Homo sapiens
Biosample type
24
tissue
3
primary cell
1
cell line
Organ
163
kidney
112
pancreas
91
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
35
musculature of body
34
brain
32
eye
30
connective tissue
25
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
5
adipose tissue
3
nerve
3
vein
1
pituitary gland
1
skin of body
Project
28
AMP
Genome assembly (visualization)
27
hg19
7
GRCh38
Lab
20
Karen Mohlke, UNC
8
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
files.file_type!
fastq
BIOSAMPLE
ASSAY
28 results
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ATAC-seq
DNase-seq
tissue
liver
20
tibial nerve
1
2
right lobe of liver
1
primary cell
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
cell line
HepG2
1
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