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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
5
DNase-seq
Assay category
501
DNA binding
193
Transcription
27
DNA accessibility
4
3D chromatin structure
3
DNA methylation
1
DNA sequencing
Date released
20
May, 2022
3
November, 2018
August, 2017
2
June, 2019
1
February, 2021
1
October, 2019
Available data
27
bed narrowPeak
25
bigWig
7
bam
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
5
bigBed narrowPeak
3
fastq
1
bed bed3
Organism
27
Homo sapiens
Biosample type
23
tissue
3
primary cell
1
cell line
Organ
168
pancreas
163
kidney
119
epithelium
77
heart
57
vasculature
55
blood vessel
49
artery
limb
37
brain
35
musculature of body
32
connective tissue
32
eye
27
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
7
adipose tissue
3
nerve
2
spleen
2
vein
1
pituitary gland
1
skin of body
Project
27
AMP
Genome assembly (visualization)
27
hg19
7
GRCh38
Lab
20
Karen Mohlke, UNC
7
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
files.file_type!
tar
month_released!
August, 2017
organ_slims!
limb
BIOSAMPLE
ASSAY
27 results
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ATAC-seq
DNase-seq
tissue
liver
20
2
right lobe of liver
1
primary cell
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
cell line
HepG2
1
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