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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
9
snATAC-seq
2
ATAC-seq
Assay category
99
DNA binding
44
DNA accessibility
9
Transcription
6
3D chromatin structure
6
DNA methylation
Date released
33
June, 2019
8
January, 2021
2
January, 2018
1
May, 2022
Available data
35
bigWig
34
bed bed3+
33
bam
33
bed broadPeak
33
bed narrowPeak
33
bigBed broadPeak
33
bigBed narrowPeak
1
txt
Organism
44
Homo sapiens
Biosample type
34
tissue
9
primary cell
1
cell line
Organ
173
pancreas
123
epithelium
99
kidney
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
36
AMP
8
T1D
Genome assembly (visualization)
36
hg19
33
GRCh38
Lab
36
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
audit script error
1
inconsistent ontology term
files.file_type!
xls
organ_slims!
embryo
BIOSAMPLE
ASSAY
44 results
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DNase-seq
snATAC-seq
ATAC-seq
tissue
muscle of arm
17
muscle of leg
13
skeletal muscle tissue
1
1
forelimb muscle
1
hindlimb muscle
1
primary cell
peripheral blood mononuclear cell
8
skeletal muscle cell
1
cell line
GM12878
1
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