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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ATAC-seq
21
snATAC-seq
Assay category
77
DNA methylation
67
DNA accessibility
52
Transcription
Date released
60
May, 2022
4
February, 2021
3
February, 2023
Available data
492
bed narrowPeak
389
bam
350
bigWig
241
bigBed narrowPeak
209
bed bed3+
208
bed broadPeak
206
bigBed broadPeak
102
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
1
tar
0
bigBed bedMethyl
Organism
67
Homo sapiens
Biosample type
60
primary cell
7
in vitro differentiated cells
Organ
39
epithelium
39
pancreas
4
connective tissue
Project
60
HPAP
7
AMP
Genome assembly (visualization)
7
hg19
Lab
60
Klaus Kaestner, Upenn
4
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
67 results
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ATAC-seq
snATAC-seq
primary cell
pancreatic alpha cell
22
Langerhans cell
21
pancreatic beta cell
13
pancreatic acinar cell
4
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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