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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
DNase-seq
1
ATAC-seq
Assay category
189
DNA accessibility
114
DNA binding
Date released
169
June, 2019
9
November, 2018
7
October, 2019
2
August, 2017
1
November, 2020
1
October, 2017
Available data
474
bed narrowPeak
370
bam
332
bigWig
223
bigBed narrowPeak
191
bed bed3+
189
bed broadPeak
188
bigBed broadPeak
101
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
189
Homo sapiens
Biosample type
159
tissue
28
primary cell
1
cell line
1
in vitro differentiated cells
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
ureter
16
epithelium
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
189
AMP
Genome assembly (visualization)
188
GRCh38
166
hg19
Lab
188
AMP-T2D consortium
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
lab.title!
Bing Ren, UCSD
Mark McCarthy, Oxford
organ_slims!
ureter
BIOSAMPLE
ASSAY
189 results
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Clear Filters
DNase-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 37 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 18 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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