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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
200
DNase-seq
23
ATAC-seq
5
FAIRE-seq
Assay category
786
DNA binding
228
DNA accessibility
23
3D chromatin structure
Date released
181
June, 2019
14
September, 2018
9
November, 2018
9
October, 2019
8
August, 2017
5
September, 2017
2
July, 2019
Available data
475
bed narrowPeak
375
bam
332
bigWig
228
bigBed narrowPeak
199
bed broadPeak
197
bed bed3+
197
bigBed broadPeak
98
fastq
64
xls
60
zippedFastqFolder
14
tsv
6
bed bed3
4
txt
3
bed bedgraph
1
tar
0
hic
Organism
228
Homo sapiens
Biosample type
180
tissue
46
primary cell
2
cell line
Organ
80
kidney
40
epithelium
36
limb
33
brain
33
musculature of body
32
pancreas
30
heart
18
ureter
connective tissue
12
vasculature
10
blood vessel
6
liver
4
adipose tissue
4
artery
4
eye
3
vein
2
nerve
1
spleen
Project
228
AMP
Genome assembly (visualization)
221
GRCh38
206
hg19
Lab
228
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
228 results
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Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
1
muscle of leg
13
+ See 39 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
endothelial cell of umbilical vein
2
1
+ See 18 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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