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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
130
DNase-seq
27
ATAC-seq
4
FAIRE-seq
Assay category
777
DNA binding
161
DNA accessibility
Date released
109
June, 2019
14
September, 2018
11
October, 2019
10
August, 2017
10
November, 2018
5
September, 2017
1
July, 2019
1
November, 2020
Available data
348
bed narrowPeak
309
bam
265
bigWig
161
bigBed narrowPeak
131
bed bed3+
129
bed broadPeak
128
bigBed broadPeak
101
fastq
60
zippedFastqFolder
12
bed bed3
12
tsv
7
bed bedgraph
4
txt
1
tar
Organism
161
Homo sapiens
Biosample type
115
tissue
42
primary cell
3
in vitro differentiated cells
1
cell line
Organ
kidney
40
epithelium
36
limb
33
brain
33
musculature of body
32
pancreas
30
heart
18
ureter
13
connective tissue
12
vasculature
10
blood vessel
6
liver
4
adipose tissue
4
artery
4
eye
3
vein
2
nerve
1
spleen
Project
161
AMP
Genome assembly (visualization)
152
GRCh38
145
hg19
Lab
161
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
lab.title!
Stephen Parker, UMich
month_released!
March, 2020
organ_slims!
kidney
BIOSAMPLE
ASSAY
161 results
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Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
brain
14
muscle of leg
13
body of pancreas
4
+ See 33 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cardiac fibroblast
3
+ See 14 more…
in vitro differentiated cells
adipocyte
1
2
cell line
Panc1
1
See all biosamples
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