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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
DNase-seq
9
ATAC-seq
Assay category
474
Transcription
75
DNA binding
36
DNA accessibility
2
DNA methylation
1
3D chromatin structure
Date released
24
June, 2019
3
October, 2019
2
August, 2017
2
August, 2021
1
February, 2021
1
January, 2018
1
November, 2018
1
November, 2020
1
October, 2017
Available data
36
bigWig
35
bed narrowPeak
32
bam
31
bigBed narrowPeak
30
bed bed3+
27
bed broadPeak
27
bigBed broadPeak
6
bed bed3
4
bed bedgraph
4
fastq
Organism
36
Homo sapiens
Biosample type
24
tissue
7
primary cell
5
in vitro differentiated cells
Organ
80
kidney
52
epithelium
51
pancreas
38
limb
35
brain
34
heart
34
musculature of body
26
liver
18
connective tissue
18
ureter
15
vasculature
13
blood vessel
6
adipose tissue
6
artery
4
eye
3
nerve
3
vein
2
spleen
1
blood
1
bodily fluid
Project
36
AMP
Genome assembly (visualization)
35
hg19
30
GRCh38
Lab
34
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
month_released!
December, 2018
BIOSAMPLE
ASSAY
36 results
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DNase-seq
ATAC-seq
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
omental fat pad
2
1
adipose tissue
2
+ See 1 more…
primary cell
cardiac fibroblast
3
osteoblast
1
1
brain pericyte
1
hepatic stellate cell
1
in vitro differentiated cells
adipocyte
1
3
osteoblast
1
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