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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 61ATAC-seq
  • 27snATAC-seq
  • 12DNase-seq
  • 2FAIRE-seq
Assay category
  • 857DNA binding
  • 371Transcription
  • 102DNA accessibility
  • 21DNA methylation
  • 13D chromatin structure
Date released
  • 27February, 2021
  • 18May, 2022
  • 14September, 2018
  • 10November, 2018
  • 9August, 2017
  • 8October, 2017
  • 7August, 2020
  • 5September, 2017
  • 3September, 2020
  • 1March, 2019
Available data
  • 492bed narrowPeak
  • 389bam
  • 350bigWig
  • 241bigBed narrowPeak
  • 209bed bed3+
  • 208bed broadPeak
  • 206bigBed broadPeak
  • 102fastq
  • 64xls
  • 60zippedFastqFolder
  • 14tsv
  • 12bed bed3
  • 7bed bedgraph
  • 4txt
  • 1tar
Organism
  • 102Homo sapiens
Biosample type
  • 60primary cell
  • 41tissue
  • 1in vitro differentiated cells
Organ
  • 61pancreas
  • 32epithelium
  • 4connective tissue
  • 4liver
  • 3adipose tissue
  • 3brain
  • 2spleen
Project
  • 65AMP
  • 37HPAP
Genome assembly (visualization)
  • 63hg19
  • 53GRCh38
Lab
  • 45AMP-T2D consortium
  • 37Klaus Kaestner, Upenn
  • 18Kyle Gaulton, UCSD
  • 1Mark McCarthy, Oxford
  • 1Stephen Parker, UMich
Audit category:
  • 27audit script error
BIOSAMPLE
ASSAY

102 results

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Clear Filters
ATAC-seq
snATAC-seq
DNase-seq
FAIRE-seq
primary cell
Langerhans cell27
pancreatic alpha cell13
pancreatic beta cell10
pancreatic acinar cell5
pancreatic ductal cell4
tissue
islet of Langerhans2011
body of pancreas42
brain2
liver2
omental fat pad11
in vitro differentiated cells
adipocyte1
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