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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ATAC-seq
48
snATAC-seq
10
DNase-seq
Assay category
215
Transcription
163
DNA binding
157
DNA accessibility
52
DNA methylation
1
3D chromatin structure
Date released
78
May, 2022
27
February, 2021
14
September, 2018
8
November, 2018
7
August, 2017
7
August, 2020
7
October, 2017
5
September, 2017
3
September, 2020
1
March, 2019
Available data
97
fastq
60
zippedFastqFolder
59
bam
58
bed narrowPeak
51
bigWig
34
bigBed narrowPeak
12
bed broadPeak
10
bigBed broadPeak
8
bed bed3+
Organism
157
Homo sapiens
Biosample type
120
primary cell
36
tissue
1
in vitro differentiated cells
Organ
97
pancreas
71
epithelium
4
connective tissue
4
liver
3
adipose tissue
2
spleen
1
brain
Project
97
HPAP
60
AMP
Genome assembly (visualization)
59
hg19
50
GRCh38
Lab
97
Klaus Kaestner, Upenn
40
AMP-T2D consortium
18
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
27
audit script error
BIOSAMPLE
ASSAY
157 results
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ATAC-seq
snATAC-seq
DNase-seq
primary cell
Langerhans cell
48
pancreatic alpha cell
35
pancreatic beta cell
23
pancreatic acinar cell
9
pancreatic ductal cell
4
+ See 1 more…
tissue
islet of Langerhans
20
body of pancreas
4
2
liver
2
omental fat pad
1
1
right lobe of liver
1
1
+ See 3 more…
in vitro differentiated cells
adipocyte
1
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