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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 99ATAC-seq
  • 48snATAC-seq
  • 10DNase-seq
Assay category
  • 215Transcription
  • 163DNA binding
  • 157DNA accessibility
  • 52DNA methylation
  • 13D chromatin structure
Date released
  • 78May, 2022
  • 27February, 2021
  • 14September, 2018
  • 8November, 2018
  • 7August, 2017
  • 7August, 2020
  • 7October, 2017
  • 5September, 2017
  • 3September, 2020
  • 1March, 2019
Available data
  • 97fastq
  • 60zippedFastqFolder
  • 59bam
  • 58bed narrowPeak
  • 51bigWig
  • 34bigBed narrowPeak
  • 12bed broadPeak
  • 10bigBed broadPeak
  • 8bed bed3+
Organism
  • 157Homo sapiens
Biosample type
  • 120primary cell
  • 36tissue
  • 1in vitro differentiated cells
Organ
  • 97pancreas
  • 71epithelium
  • 4connective tissue
  • 4liver
  • 3adipose tissue
  • 2spleen
  • 1brain
Project
  • 97HPAP
  • 60AMP
Genome assembly (visualization)
  • 59hg19
  • 50GRCh38
Lab
  • 97Klaus Kaestner, Upenn
  • 40AMP-T2D consortium
  • 18Kyle Gaulton, UCSD
  • 1Mark McCarthy, Oxford
  • 1Stephen Parker, UMich
Audit category:
  • 27audit script error
BIOSAMPLE
ASSAY

157 results

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ATAC-seq
snATAC-seq
DNase-seq
primary cell
Langerhans cell48
pancreatic alpha cell35
pancreatic beta cell23
pancreatic acinar cell9
pancreatic ductal cell4
tissue
islet of Langerhans20
body of pancreas42
liver2
omental fat pad11
right lobe of liver11
in vitro differentiated cells
adipocyte1
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