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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 34ATAC-seq
  • 18snATAC-seq
Assay category
  • 154DNA binding
  • 115Transcription
  • 52DNA accessibility
Date released
  • 18May, 2022
  • 16January, 2021
  • 13February, 2023
  • 5May, 2021
Available data
  • 18bam
  • 18bed narrowPeak
  • 18fastq
  • 5bigWig
Organism
  • 52Homo sapiens
Biosample type
  • 39tissue
  • 8primary cell
  • 5in vitro differentiated cells
Organ
  • 39pancreas
  • 8blood
  • 8bodily fluid
Project
  • 29T1D
  • 23AMP
Genome assembly (visualization)
  • 23hg19
Lab
  • 562AMP-T2D consortium
  • 97Klaus Kaestner, Upenn
  • 81Katalin Susztak, Upenn
  • 52Kyle Gaulton, UCSD
  • 20Karen Mohlke, UNC
  • 10Xin Sun, UCSD
  • 5Struan F.A. Grant, CHOP
  • 2Mark McCarthy, Oxford
  • 1Bing Ren, UCSD
  • 1Maike Sander, UCSD
  • 1Stephen Parker, UMich
BIOSAMPLE
ASSAY

52 results

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ATAC-seq
snATAC-seq
tissue
islet of Langerhans296
pancreas4
primary cell
peripheral blood mononuclear cell8
in vitro differentiated cells
embryonic stem cell5
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