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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
DNase-seq
32
ATAC-seq
Assay category
486
Transcription
219
DNA binding
77
DNA accessibility
8
DNA methylation
5
3D chromatin structure
Date released
38
June, 2019
11
February, 2021
10
February, 2023
9
October, 2019
2
August, 2017
2
August, 2021
2
November, 2020
1
January, 2018
1
November, 2018
November, 2019
1
October, 2017
Available data
60
bed narrowPeak
57
bam
56
bigWig
49
bigBed narrowPeak
48
bed bed3+
45
bed broadPeak
45
bigBed broadPeak
6
bed bed3
4
bed bedgraph
4
fastq
Organism
77
Homo sapiens
Biosample type
51
tissue
18
in vitro differentiated cells
8
primary cell
Organ
163
kidney
153
pancreas
122
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
33
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
7
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
77
AMP
Genome assembly (visualization)
76
hg19
57
GRCh38
Lab
75
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
4
inconsistent ontology term
month_released!
April, 2018
November, 2019
BIOSAMPLE
ASSAY
77 results
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DNase-seq
ATAC-seq
tissue
muscle of arm
17
muscle of leg
13
adipose tissue
3
omental fat pad
2
1
tibial artery
2
1
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in vitro differentiated cells
adipocyte
1
8
chondrocyte
5
immature adipocyte
2
osteoblast
1
preadipocyte
1
primary cell
cardiac fibroblast
3
osteoblast
1
2
brain pericyte
1
hepatic stellate cell
1
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