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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ATAC-seq
8
DNase-seq
Assay category
481
Transcription
36
DNA binding
31
DNA accessibility
1
3D chromatin structure
1
DNA methylation
Date released
10
February, 2023
6
June, 2019
5
February, 2021
3
October, 2019
August, 2017
2
August, 2021
2
November, 2020
1
January, 2018
1
November, 2018
1
November, 2019
October, 2017
Available data
15
bigWig
14
bed narrowPeak
12
bed bed3+
11
bam
11
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3
4
bed bedgraph
1
fastq
Organism
31
Homo sapiens
Biosample type
17
in vitro differentiated cells
8
primary cell
6
tissue
Organ
163
kidney
163
pancreas
120
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
36
brain
35
musculature of body
32
eye
31
connective tissue
27
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
6
adipose tissue
3
nerve
3
vein
1
pituitary gland
1
skin of body
1
spleen
Project
31
AMP
Genome assembly (visualization)
30
hg19
11
GRCh38
Lab
29
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
4
inconsistent ontology term
month_released!
August, 2017
February, 2018
October, 2017
BIOSAMPLE
ASSAY
31 results
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ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
8
chondrocyte
5
immature adipocyte
2
osteoblast
1
preadipocyte
1
primary cell
cardiac fibroblast
3
osteoblast
2
1
brain pericyte
1
hepatic stellate cell
1
tissue
adipose tissue
3
omental fat pad
2
adipose tissue(adipose white tissue)
1
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