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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
6
DNase-seq
Assay category
478
Transcription
148
DNA binding
31
DNA accessibility
6
DNA methylation
1
3D chromatin structure
Date released
10
February, 2023
5
February, 2021
3
June, 2019
3
October, 2019
2
August, 2017
2
August, 2021
2
November, 2020
1
January, 2018
1
November, 2018
1
November, 2019
1
October, 2017
Available data
15
bigWig
14
bed narrowPeak
11
bam
10
bigBed narrowPeak
9
bed bed3+
6
bed bed3
6
bed broadPeak
6
bigBed broadPeak
4
bed bedgraph
4
fastq
Organism
31
Homo sapiens
Biosample type
18
in vitro differentiated cells
8
tissue
5
primary cell
Organ
169
pancreas
163
kidney
121
epithelium
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
31
AMP
Genome assembly (visualization)
31
hg19
11
GRCh38
Lab
29
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
3
inconsistent ontology term
month_released!
March, 2020
organ_slims!
gonad
heart
BIOSAMPLE
ASSAY
31 results
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ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
8
1
chondrocyte
5
immature adipocyte
2
osteoblast
1
preadipocyte
1
tissue
adipose tissue
3
omental fat pad
1
2
adipose tissue(adipose white tissue)
1
subcutaneous adipose tissue
1
primary cell
osteoblast
2
1
brain pericyte
1
hepatic stellate cell
1
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