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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 22ATAC-seq
  • 10DNase-seq
  • 1FAIRE-seq
Assay category
  • 242DNA binding
  • 33DNA accessibility
  • 30Transcription
  • 53D chromatin structure
Date released
  • 187June, 2019
  • 105February, 2023
  • 100May, 2020
  • 99May, 2022
  • 82August, 2021
  • 49February, 2021
  • 34May, 2021
  • 33October, 2019
  • 26November, 2019
  • 16January, 2021
  • 14September, 2018
  • 11August, 2017
  • 11May, 2023
  • 10April, 2020
  • 10November, 2018
  • 8July, 2019
  • 8October, 2017
  • 7August, 2020
  • 5September, 2017
  • 4March, 2019
  • 4March, 2020
  • 3January, 2018
  • 3September, 2020
  • 2November, 2020
  • 1August, 2022
Available data
  • 15bam
  • 15bed narrowPeak
  • 14bigWig
  • 12bigBed narrowPeak
  • 7bed bed3+
  • 7bed broadPeak
  • 7bigBed broadPeak
  • 1tar
Organism
  • 33Homo sapiens
Biosample type
  • 20tissue
  • 7primary cell
  • 4in vitro differentiated cells
  • 2cell line
Organ
  • 7epithelium
  • 6blood vessel
  • 6limb
  • 6vasculature
  • 4pancreas
  • 3artery
  • 3connective tissue
  • 3kidney
  • 3nerve
  • 3vein
  • 1adipose tissue
  • 1brain
  • 1eye
  • 1liver
  • 1pituitary gland
  • 1skin of body
Project
  • 33AMP
Genome assembly (visualization)
  • 18hg19
  • 14GRCh38
Lab
  • 33AMP-T2D consortium
Audit category:
  • 4inconsistent ontology term
BIOSAMPLE
ASSAY

33 results

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Clear Filters
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans13
tibial artery12
tibial nerve12
adipose tissue1
primary cell
endothelial cell of umbilical vein21
Heart fetal (cardiac muscle cell)1
Liver fetal (hepatocyte)1
kidney glomerular epithelial cell1
kidney tubule cell1
in vitro differentiated cells
adipocyte2
cardiac precursors (cardiac muscle cell)1
cardiomyocytes (cardiac muscle cell)1
cell line
Panc11
glomerular visceral epithelial cell1
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