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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
5
ATAC-seq
1
FAIRE-seq
1
snATAC-seq
Assay category
250
DNA binding
40
DNA accessibility
32
Transcription
7
DNA methylation
5
3D chromatin structure
Date released
31
June, 2019
2
July, 2019
2
November, 2018
1
February, 2023
1
January, 2018
1
May, 2022
1
October, 2017
1
October, 2019
Available data
37
bigWig
36
bam
34
bed bed3+
34
bed narrowPeak
34
bigBed narrowPeak
33
bed broadPeak
33
bigBed broadPeak
3
fastq
1
bed bed3
1
txt
Organism
40
Homo sapiens
Biosample type
34
tissue
6
primary cell
Organ
173
pancreas
163
kidney
123
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
40
AMP
Genome assembly (visualization)
35
GRCh38
27
hg19
Lab
40
AMP-T2D consortium
Audit category:
1
audit script error
organ_slims!
limb
BIOSAMPLE
ASSAY
40 results
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DNase-seq
ATAC-seq
FAIRE-seq
snATAC-seq
tissue
brain
14
1
frontal cortex
2
1
cerebellum (Hemisphere)
1
1
skeletal muscle tissue
1
1
Ammon's horn
1
+ See 11 more…
primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
+ See 1 more…
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