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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 25ATAC-seq
  • 9DNase-seq
Assay category
  • 481Transcription
  • 153DNA binding
  • 34DNA accessibility
  • 7DNA methylation
  • 13D chromatin structure
Date released
  • 10February, 2023
  • 6June, 2019
  • 5February, 2021
  • 3October, 2019
  • 2August, 2017
  • 2August, 2021
  • 2November, 2020
  • 1January, 2018
  • 1November, 2018
  • 1November, 2019
  • 1October, 2017
Available data
  • 18bigWig
  • 17bed narrowPeak
  • 14bam
  • 13bigBed narrowPeak
  • 12bed bed3+
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 6bed bed3
  • 4bed bedgraph
  • 4fastq
Organism
  • 34Homo sapiens
Biosample type
  • 18in vitro differentiated cells
  • 8primary cell
  • 8tissue
Organ
  • 173pancreas
  • 163kidney
  • 123epithelium
  • 77heart
  • 58vasculature
  • 56blood vessel
  • 49artery
  • 44limb
  • 37brain
  • 35musculature of body
  • 34connective tissue
  • 32eye
  • 29liver
  • 18ureter
  • 12bone element
  • 12skeleton
  • 10lung
  • 9blood
  • 9bodily fluid
  • 8adipose tissue
  • 3nerve
  • 3vein
  • 2spleen
  • 1pituitary gland
  • 1skin of body
Project
  • 34AMP
Genome assembly (visualization)
  • 33hg19
  • 14GRCh38
Lab
  • 32AMP-T2D consortium
  • 2Struan F.A. Grant, CHOP
Audit category:
  • 4inconsistent ontology term
BIOSAMPLE
ASSAY

34 results

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Clear Filters
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte81
chondrocyte5
immature adipocyte2
osteoblast1
preadipocyte1
primary cell
cardiac fibroblast3
osteoblast21
brain pericyte1
hepatic stellate cell1
tissue
adipose tissue3
omental fat pad12
adipose tissue(adipose white tissue)1
subcutaneous adipose tissue1
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