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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 81DNase-seq
  • 75ATAC-seq
  • 6snATAC-seq
  • 1FAIRE-seq
Assay category
  • 163DNA accessibility
  • 125Transcription
  • 52DNA binding
  • 4DNA methylation
  • 13D chromatin structure
Date released
  • 78June, 2019
  • 70August, 2021
  • 11May, 2023
  • 3October, 2019
  • 1July, 2019
Available data
  • 144bed narrowPeak
  • 80bam
  • 80bigBed narrowPeak
  • 80bigWig
  • 78bed bed3+
  • 78bed broadPeak
  • 78bigBed broadPeak
  • 64xls
Organism
  • 163Homo sapiens
Biosample type
  • 150tissue
  • 12primary cell
  • 1cell line
Organ
  • 173pancreas
  • 163kidney
  • 123epithelium
  • 77heart
  • 58vasculature
  • 56blood vessel
  • 49artery
  • 44limb
  • 37brain
  • 36musculature of body
  • 34connective tissue
  • 32eye
  • 29liver
  • 18ureter
  • 12bone element
  • 12skeleton
  • 10lung
  • 9blood
  • 9bodily fluid
  • 8adipose tissue
  • 3nerve
  • 3vein
  • 2spleen
  • 1pituitary gland
  • 1skin of body
Project
  • 163AMP
Genome assembly (visualization)
  • 154GRCh38
  • 73hg19
Lab
  • 82AMP-T2D consortium
  • 81Katalin Susztak, Upenn
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

163 results

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Clear Filters
DNase-seq
ATAC-seq
snATAC-seq
FAIRE-seq
tissue
kidney137561
renal cortex interstitium11
renal pelvis10
right kidney10
left kidney9
primary cell
kidney tubule cell3
glomerular visceral epithelial cell2
kidney glomerular epithelial cell2
epithelial cell of proximal tubule1
glomerular endothelial cell1
cell line
glomerular visceral epithelial cell1
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