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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
5
DNase-seq
Assay category
451
DNA binding
188
Transcription
27
DNA accessibility
6
DNA methylation
3
3D chromatin structure
1
DNA sequencing
Date released
20
May, 2022
3
November, 2018
2
August, 2017
1
February, 2021
1
June, 2019
Available data
26
bed narrowPeak
25
bigWig
6
bam
5
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
fastq
1
bed bed3
Organism
27
Homo sapiens
Biosample type
25
tissue
1
cell line
1
primary cell
Organ
173
pancreas
163
kidney
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
27
AMP
Genome assembly (visualization)
26
hg19
6
GRCh38
Lab
20
Karen Mohlke, UNC
7
AMP-T2D consortium
Audit category:
1
inconsistent replicate
organ_slims!
epithelium
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
27 results
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ATAC-seq
DNase-seq
tissue
liver
20
2
right lobe of liver
1
2
cell line
HepG2
1
primary cell
hepatic stellate cell
1
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