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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 23ATAC-seq
  • 6DNase-seq
Assay category
  • 552DNA binding
  • 193Transcription
  • 29DNA accessibility
  • 7DNA methylation
  • 43D chromatin structure
  • 1DNA sequencing
Date released
  • 20May, 2022
  • 3November, 2018
  • 2August, 2017
  • 2June, 2019
  • 1February, 2021
  • 1October, 2019
Available data
  • 28bed narrowPeak
  • 26bigWig
  • 8bam
  • 6bigBed narrowPeak
  • 5bed bed3+
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 4fastq
  • 1bed bed3
Organism
  • 29Homo sapiens
Biosample type
  • 25tissue
  • 3primary cell
  • 1cell line
Organ
  • 173pancreas
  • 163kidney
  • 123epithelium
  • 77heart
  • 58vasculature
  • 56blood vessel
  • 49artery
  • 44limb
  • 37brain
  • 36musculature of body
  • 34connective tissue
  • 32eye
  • 29liver
  • 18ureter
  • 12bone element
  • 12skeleton
  • 10lung
  • 9blood
  • 9bodily fluid
  • 8adipose tissue
  • 3nerve
  • 3vein
  • 2spleen
  • 1pituitary gland
  • 1skin of body
Project
  • 29AMP
Genome assembly (visualization)
  • 28hg19
  • 8GRCh38
Lab
  • 20Karen Mohlke, UNC
  • 9AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
  • 1inconsistent replicate
BIOSAMPLE
ASSAY

29 results

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Clear Filters
ATAC-seq
DNase-seq
tissue
liver202
right lobe of liver12
primary cell
Liver fetal (hepatocyte)1
hepatic stellate cell1
hepatocyte1
cell line
HepG21
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