Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ATAC-seq
22
DNase-seq
7
snATAC-seq
1
FAIRE-seq
Assay category
574
DNA binding
120
DNA accessibility
57
Transcription
27
DNA methylation
10
3D chromatin structure
Date released
55
May, 2020
23
November, 2019
16
June, 2019
6
October, 2019
5
February, 2021
4
August, 2021
3
August, 2017
3
February, 2023
3
January, 2021
2
March, 2020
Available data
51
bed narrowPeak
49
bam
28
bigWig
23
bigBed narrowPeak
20
bed broadPeak
20
bigBed broadPeak
18
bed bed3+
7
bed bedgraph
3
txt
2
fastq
1
bed bed3
1
tar
1
tsv
Organism
120
Homo sapiens
Biosample type
74
primary cell
27
tissue
14
in vitro differentiated cells
5
cell line
Organ
25
pancreas
14
epithelium
11
kidney
7
connective tissue
5
brain
5
vasculature
3
blood vessel
2
heart
2
vein
1
eye
1
liver
Project
117
AMP
3
T1D
Genome assembly (visualization)
55
hg19
46
GRCh38
Lab
110
AMP-T2D consortium
4
Katalin Susztak, Upenn
3
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
12
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
120 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
DNase-seq
snATAC-seq
FAIRE-seq
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
cardiac fibroblast
2
endothelial cell of umbilical vein
1
1
+ See 13 more…
tissue
islet of Langerhans
19
1
kidney
4
pancreas
2
middle frontal gyrus
1
in vitro differentiated cells
adipocyte
4
1
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
+ See 2 more…
cell line
EndoC_BH1
2
HepG2
1
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
Download