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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
ChIP-seq
Assay category
97
DNA binding
5
Transcription
Target of assay
75
control
14
histone
14
histone modification
9
narrow histone mark
8
transcription factor
5
broad histone mark
2
RNA binding protein
Date released
164
August, 2017
93
November, 2017
68
October, 2019
45
May, 2021
29
October, 2018
23
May, 2019
23
May, 2020
22
December, 2017
15
April, 2019
13
August, 2021
9
October, 2017
8
February, 2018
8
June, 2019
7
November, 2018
6
September, 2017
4
December, 2018
4
January, 2019
3
February, 2021
2
November, 2019
Available data
417
bam
355
bigWig
349
fastq
bed narrowPeak
333
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
97
Homo sapiens
Biosample type
69
cell line
25
tissue
3
primary cell
Organ
66
liver
27
brain
3
blood
3
bodily fluid
2
epithelium
2
vasculature
1
blood vessel
1
spleen
Project
97
AMP
Genome assembly (visualization)
22
hg19
Lab
97
AMP-T2D consortium
Audit category:
2
inconsistent control read length
assay_slims!
3D chromatin structure
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
97 results
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ChIP-seq
cell line
HepG2
66
GM12878
3
tissue
cingulate gyrus
7
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
middle frontal area 46
3
+ See 2 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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