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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
Assay category
Transcription
34
DNA binding
27
DNA accessibility
4
3D chromatin structure
2
DNA methylation
Target of assay
21
histone
21
histone modification
13
narrow histone mark
8
broad histone mark
7
control
6
transcription factor
3
RNA binding protein
Date released
22
June, 2019
4
December, 2017
3
May, 2019
3
May, 2021
2
October, 2019
Available data
34
bam
27
bed narrowPeak
27
bigWig
20
bigBed narrowPeak
4
fastq
3
tagAlign
Organism
34
Homo sapiens
Biosample type
cell line
25
primary cell
7
in vitro differentiated cells
2
tissue
Organ
11
connective tissue
10
epithelium
8
musculature of body
6
kidney
4
embryo
4
heart
2
brain
Project
34
AMP
Genome assembly (visualization)
27
GRCh38
27
hg19
Lab
34
AMP-T2D consortium
Audit category:
34
inconsistent ontology term
27
inconsistent control
Audit category:
1
inconsistent control read length
assay_slims!
Transcription
assay_title!
pCHi-C
biosample_type!
cell line
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
4
epithelial cell of proximal tubule
3
kidney epithelial cell
3
in vitro differentiated cells
Hepatic endoderm
4
cardiomyocytes
3
tissue
brodmann area 43
1
insular gyrus
1
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