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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
263
ChIP-seq
Assay category
263
DNA binding
Transcription
15
DNA methylation
11
DNA accessibility
Target of assay
187
histone modification
186
histone
103
broad histone mark
82
narrow histone mark
48
control
28
transcription factor
6
RNA binding protein
3
chromatin remodeller
Date released
406
November, 2017
263
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
80
April, 2019
79
December, 2017
74
October, 2018
70
November, 2018
50
May, 2020
40
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
4
September, 2017
3
March, 2020
Available data
181
bam
181
fastq
171
bigWig
132
bed narrowPeak
85
tagAlign
39
bed broadPeak
bed bed3+
32
bigBed narrowPeak
13
bigBed broadPeak
Organism
256
Homo sapiens
Biosample type
150
tissue
60
in vitro differentiated cells
53
primary cell
Organ
106
connective tissue
75
pancreas
46
adipose tissue
45
liver
26
epithelium
22
musculature of body
Project
263
AMP
Genome assembly (visualization)
140
hg19
118
GRCh38
Lab
263
AMP-T2D consortium
Audit category:
25
missing controlled_by
Audit category:
12
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
assay_slims!
Transcription
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
263 results
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Clear Filters
ChIP-seq
tissue
liver
45
subcutaneous abdominal adipose tissue
36
islet of Langerhans
23
skeletal muscle tissue
22
pancreas
14
+ See 2 more…
in vitro differentiated cells
adipocyte
60
primary cell
skeletal muscle myoblast
15
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
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