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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
5
RRBS
3
WGBS
Assay category
59
DNA binding
37
DNA accessibility
9
Transcription
8
DNA methylation
6
3D chromatin structure
Target of assay
39
histone
39
histone modification
24
broad histone mark
15
narrow histone mark
14
control
6
transcription factor
3
other context
3
other post-translational modification
Date released
26
August, 2017
10
June, 2019
8
November, 2018
7
December, 2018
7
January, 2019
7
May, 2019
2
July, 2019
Available data
42
bigWig
40
bam
39
bed narrowPeak
26
bigBed narrowPeak
24
fastq
15
tagAlign
13
bed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
67
Homo sapiens
Biosample type
56
tissue
11
primary cell
Organ
559
liver
271
pancreas
220
brain
182
epithelium
160
connective tissue
144
heart
105
vasculature
101
blood vessel
79
adipose tissue
67
limb
60
blood
60
bodily fluid
56
kidney
45
musculature of body
35
nerve
34
artery
22
embryo
22
spleen
17
vein
6
eye
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
Project
67
AMP
Genome assembly (visualization)
42
hg19
28
GRCh38
Lab
67
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
shRNA RNA-seq
BIOSAMPLE
ASSAY
67 results
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Clear Filters
ChIP-seq
RRBS
WGBS
tissue
skeletal muscle tissue
22
4
spleen
20
2
muscle of leg
7
1
primary cell
skeletal muscle satellite cell
8
skeletal muscle cell
2
1
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