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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
ChIP-seq
Assay category
127
Transcription
118
DNA binding
18
DNA accessibility
0
DNA methylation
Target of assay
77
histone
77
histone modification
39
narrow histone mark
37
broad histone mark
36
transcription factor
6
RNA binding protein
5
control
3
chromatin remodeller
Date released
48
August, 2017
38
December, 2017
16
February, 2018
13
August, 2021
3
May, 2021
Available data
118
bam
113
bigWig
108
bed narrowPeak
102
fastq
19
bed bed3+
16
tagAlign
14
bigBed narrowPeak
Organism
118
Homo sapiens
Biosample type
524
tissue
328
cell line
149
primary cell
118
in vitro differentiated cells
3
stem cell
Organ
48
connective tissue
18
epithelium
15
embryo
14
liver
pancreas
Project
118
AMP
Genome assembly (visualization)
118
GRCh38
117
hg19
Lab
118
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
17
inconsistent control read length
organ_slims!
pancreas
BIOSAMPLE
ASSAY
118 results
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ChIP-seq
in vitro differentiated cells
adipocyte
48
hepatocyte
14
neural progenitor cell
13
pancreatic endoderm
13
definitive endodermal cell
7
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