Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
Assay category
138
Transcription
63
DNA binding
21
DNA accessibility
4
3D chromatin structure
0
DNA methylation
Target of assay
29
control
22
histone
22
histone modification
12
transcription factor
11
broad histone mark
11
narrow histone mark
5
RNA binding protein
Date released
38
May, 2021
August, 2017
9
December, 2017
8
August, 2021
8
February, 2018
Available data
93
bam
bed narrowPeak
68
bigWig
67
fastq
26
tagAlign
14
bigBed narrowPeak
12
bed bed3+
Organism
63
Homo sapiens
Biosample type
222
tissue
93
cell line
85
primary cell
63
in vitro differentiated cells
1
stem cell
Organ
8
embryo
4
epithelium
1
liver
1
pancreas
Project
63
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
37
Kyle Gaulton, UCSD
26
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bed narrowPeak
month_released!
August, 2017
BIOSAMPLE
ASSAY
63 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell
38
neural progenitor cell
8
pancreatic endoderm
6
Hepatic endoderm
2
definitive endodermal cell
2
+ See 6 more…
See all biosamples
Download