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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
ChIP-seq
2
WGBS
Assay category
96
DNA binding
67
Transcription
56
DNA accessibility
4
3D chromatin structure
2
DNA methylation
Target of assay
69
histone
69
histone modification
45
broad histone mark
24
narrow histone mark
20
control
7
transcription factor
3
RNA binding protein
Date released
50
May, 2019
40
October, 2019
6
February, 2021
2
July, 2019
Available data
98
bam
74
bigWig
71
bed narrowPeak
67
bigBed narrowPeak
6
tagAlign
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
98
Homo sapiens
Biosample type
75
tissue
17
primary cell
6
cell line
Organ
559
liver
271
pancreas
brain
182
epithelium
160
connective tissue
144
heart
105
vasculature
101
blood vessel
79
adipose tissue
67
limb
60
blood
60
bodily fluid
56
kidney
45
musculature of body
35
nerve
34
artery
22
embryo
22
spleen
17
vein
6
eye
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
Project
98
AMP
Genome assembly (visualization)
73
hg19
72
GRCh38
Lab
98
AMP-T2D consortium
lab.title!
Katalin Susztak, Upenn
organ_slims!
brain
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ChIP-seq
WGBS
tissue
tibial artery
23
ascending aorta
16
thoracic aorta
16
aorta
13
2
coronary artery
5
primary cell
endothelial cell of umbilical vein
17
cell line
smooth muscle cell of the coronary artery
6
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