Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
222
ChIP-seq
10
WGBS
2
RRBS
Assay category
222
DNA binding
178
Transcription
87
DNA accessibility
12
DNA methylation
8
3D chromatin structure
Target of assay
165
histone
165
histone modification
102
broad histone mark
63
narrow histone mark
37
control
20
transcription factor
14
RNA binding protein
Date released
66
May, 2019
57
April, 2019
45
October, 2019
40
May, 2024
12
July, 2019
6
February, 2021
5
June, 2019
3
November, 2017
Available data
190
bigWig
189
bam
180
bed narrowPeak
130
bigBed narrowPeak
9
bed bedMethyl
9
bigBed bedMethyl
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
3
fastq
Organism
234
Homo sapiens
Biosample type
202
tissue
26
primary cell
6
cell line
Organ
559
liver
271
pancreas
220
brain
182
epithelium
160
connective tissue
144
heart
105
vasculature
101
blood vessel
79
adipose tissue
67
limb
blood
60
bodily fluid
56
kidney
45
musculature of body
35
nerve
34
artery
22
embryo
22
spleen
17
vein
6
eye
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
Project
234
AMP
Genome assembly (visualization)
186
GRCh38
145
hg19
Lab
194
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
5
inconsistent ontology term
organ_slims!
blood
BIOSAMPLE
ASSAY
234 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
RRBS
tissue
heart left ventricle
35
4
1
left cardiac atrium
40
tibial artery
23
ascending aorta
16
thoracic aorta
16
+ See 6 more…
primary cell
endothelial cell of umbilical vein
17
cardiac fibroblast
5
1
brain microvascular endothelial cell
3
cell line
smooth muscle cell of the coronary artery
6
See all biosamples
Download