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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
296
ChIP-seq
89
total RNA-seq
Assay category
296
DNA binding
89
Transcription
15
DNA methylation
11
DNA accessibility
Target of assay
199
histone modification
198
histone
109
broad histone mark
88
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
571
February, 2021
406
November, 2017
385
August, 2017
347
May, 2021
272
October, 2019
240
May, 2020
223
August, 2021
168
July, 2018
120
May, 2019
94
December, 2017
94
February, 2023
80
April, 2019
76
October, 2018
71
November, 2018
65
July, 2019
60
May, 2022
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
33
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
18
March, 2020
15
October, 2017
9
April, 2020
8
December, 2019
6
September, 2017
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
Available data
270
bam
270
fastq
260
bigWig
132
bed narrowPeak
89
tsv
85
tagAlign
39
bed broadPeak
33
bed bed3+
32
bigBed narrowPeak
13
bigBed broadPeak
Organism
378
Homo sapiens
Biosample type
265
tissue
67
in vitro differentiated cells
53
primary cell
Organ
183
pancreas
117
connective tissue
50
adipose tissue
48
liver
26
epithelium
22
musculature of body
Project
385
AMP
Genome assembly (visualization)
262
hg19
240
GRCh38
Lab
385
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
month_released!
March, 2019
BIOSAMPLE
ASSAY
385 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
islet of Langerhans
42
89
liver
48
subcutaneous abdominal adipose tissue
36
skeletal muscle tissue
22
pancreas
14
+ See 2 more…
in vitro differentiated cells
adipocyte
67
primary cell
skeletal muscle myoblast
15
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
See all biosamples
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