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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
Assay category
166
Transcription
154
DNA binding
31
DNA accessibility
12
DNA methylation
3
3D chromatin structure
Target of assay
103
histone
103
histone modification
61
broad histone mark
42
narrow histone mark
28
control
23
transcription factor
11
RNA binding protein
3
other context
3
other post-translational modification
Date released
57
April, 2019
40
May, 2024
21
May, 2019
7
December, 2018
7
January, 2019
6
February, 2021
6
November, 2018
5
June, 2019
5
October, 2019
Available data
126
bed narrowPeak
126
bigWig
113
bam
76
bigBed narrowPeak
20
fastq
6
tagAlign
Organism
154
Homo sapiens
Biosample type
143
tissue
6
cell line
5
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
154
AMP
Genome assembly (visualization)
125
GRCh38
86
hg19
Lab
114
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
assay_title!
ATAC-seq
lab.title!
Xin Sun, UCSD
BIOSAMPLE
ASSAY
154 results
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Clear Filters
ChIP-seq
tissue
left cardiac atrium
40
heart left ventricle
35
spleen
20
heart
14
heart right ventricle
13
+ See 3 more…
cell line
smooth muscle cell of the coronary artery
6
primary cell
cardiac fibroblast
5
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