Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
110
ChIP-seq
Assay category
167
Transcription
110
DNA binding
103
DNA accessibility
53
DNA methylation
7
3D chromatin structure
Target of assay
78
histone
78
histone modification
41
narrow histone mark
37
broad histone mark
24
control
8
transcription factor
7
RNA binding protein
1
chromatin remodeller
Date released
26
August, 2017
24
October, 2019
21
September, 2018
19
December, 2017
6
June, 2019
6
November, 2017
5
May, 2019
August, 2021
3
May, 2021
Available data
110
bam
85
bigWig
81
bed narrowPeak
72
fastq
36
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
3
tagAlign
Organism
110
Homo sapiens
Biosample type
88
primary cell
22
in vitro differentiated cells
cell line
Organ
218
brain
190
pancreas
170
liver
153
connective tissue
128
heart
110
epithelium
96
vasculature
93
blood vessel
73
adipose tissue
66
limb
42
kidney
39
musculature of body
35
nerve
28
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
110
AMP
Genome assembly (visualization)
85
hg19
81
GRCh38
Lab
110
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
assay_title!
CRISPR genome editing followed by DNA sequencing
biosample_type!
cell line
month_released!
August, 2021
BIOSAMPLE
ASSAY
110 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
17
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic ductal cell
13
epithelial cell of proximal tubule
10
+ See 5 more…
in vitro differentiated cells
hepatocyte
15
Hepatic endoderm
4
pancreatic PP cell
3
See all biosamples
Download