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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
199
ChIP-seq
Assay category
199
DNA binding
Target of assay
199
histone modification
198
histone
109
broad histone mark
88
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
199
August, 2017
196
October, 2019
140
May, 2021
92
May, 2019
88
November, 2017
60
April, 2019
35
May, 2024
32
September, 2018
31
December, 2017
30
October, 2018
27
May, 2020
20
August, 2021
19
June, 2019
16
February, 2018
12
October, 2017
10
November, 2019
7
January, 2019
3
March, 2020
Available data
123
bigWig
108
bed narrowPeak
103
bam
103
fastq
74
tagAlign
37
bed broadPeak
30
bigBed narrowPeak
12
bed bed3+
11
bigBed broadPeak
Organism
193
Homo sapiens
Biosample type
124
tissue
38
primary cell
37
in vitro differentiated cells
Organ
69
connective tissue
66
pancreas
33
liver
32
adipose tissue
19
musculature of body
14
epithelium
Project
199
AMP
Genome assembly (visualization)
123
hg19
103
GRCh38
Lab
199
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
assay_title!
GRO-seq
month_released!
September, 2017
BIOSAMPLE
ASSAY
199 results
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Clear Filters
ChIP-seq
tissue
liver
33
subcutaneous abdominal adipose tissue
31
islet of Langerhans
28
skeletal muscle tissue
19
pancreas
12
+ See 1 more…
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
12
pancreatic alpha cell
7
pancreatic beta cell
7
in vitro differentiated cells
adipocyte
37
See all biosamples
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