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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
Assay category
146
Transcription
93
DNA binding
35
DNA accessibility
Target of assay
86
histone
86
histone modification
46
narrow histone mark
40
broad histone mark
7
transcription factor
6
RNA binding protein
1
chromatin remodeller
Date released
21
September, 2018
16
December, 2017
16
October, 2019
14
August, 2017
11
November, 2019
4
June, 2019
4
May, 2019
3
August, 2021
3
May, 2021
1
March, 2020
Available data
97
bam
97
bed narrowPeak
97
bigWig
55
fastq
36
bigBed narrowPeak
5
tagAlign
4
bed broadPeak
bigBed broadPeak
3
bed bed3+
Organism
93
Homo sapiens
Biosample type
62
primary cell
18
in vitro differentiated cells
13
cell line
Organ
316
liver
165
brain
157
pancreas
113
heart
93
epithelium
75
connective tissue
71
blood vessel
71
vasculature
54
blood
54
bodily fluid
47
limb
39
kidney
25
artery
24
nerve
18
adipose tissue
15
embryo
13
musculature of body
12
spleen
10
vein
2
eye
1
pituitary gland
Project
91
AMP
2
T1D
Genome assembly (visualization)
95
hg19
93
GRCh38
Lab
93
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
assay_title!
pCHi-C
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
93 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
13
endothelial cell of umbilical vein
10
epithelial cell of proximal tubule
8
pancreatic acinar cell
8
pancreatic alpha cell
7
+ See 4 more…
in vitro differentiated cells
hepatocyte
14
Hepatic endoderm
2
pancreatic PP cell
2
cell line
EndoC_BH1
13
See all biosamples
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