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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
253
ChIP-seq
Assay category
1227
Transcription
470
DNA accessibility
253
DNA binding
38
DNA methylation
16
3D chromatin structure
Target of assay
histone modification
538
histone
291
narrow histone mark
247
broad histone mark
163
control
90
transcription factor
24
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
52
August, 2017
44
October, 2018
43
December, 2017
27
October, 2019
May, 2019
23
May, 2020
20
April, 2019
12
November, 2017
10
November, 2018
7
December, 2018
6
September, 2017
5
May, 2024
3
October, 2017
1
January, 2019
Available data
230
bam
146
fastq
89
bigWig
71
bed narrowPeak
61
bigBed narrowPeak
52
tagAlign
16
bed bed3+
Organism
252
Homo sapiens
Biosample type
446
cell line
253
tissue
86
in vitro differentiated cells
40
primary cell
1
stem cell
Organ
85
liver
43
pancreas
41
adipose tissue
41
connective tissue
22
brain
20
heart
16
limb
14
spleen
11
nerve
7
kidney
5
artery
5
blood vessel
5
vasculature
3
musculature of body
Project
253
AMP
Genome assembly (visualization)
92
GRCh38
87
hg19
Lab
248
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
Audit category:
27
inconsistent control
Audit category:
18
missing controlled_by
assay_title!
shRNA RNA-seq
month_released!
May, 2019
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
253 results
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Clear Filters
ChIP-seq
tissue
liver
80
islet of Langerhans
20
body of pancreas
17
spleen
14
subcutaneous adipose tissue
12
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