Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
901
ChIP-seq
Assay category
901
DNA binding
389
DNA accessibility
195
Transcription
38
DNA methylation
16
3D chromatin structure
Target of assay
622
histone modification
621
histone
321
narrow histone mark
300
broad histone mark
185
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
195
October, 2019
171
August, 2017
115
May, 2019
82
November, 2017
80
April, 2019
73
October, 2018
50
May, 2020
48
December, 2017
40
May, 2024
15
October, 2017
10
November, 2018
7
December, 2018
7
January, 2019
6
September, 2017
2
March, 2020
Available data
716
bam
609
bigWig
589
bed narrowPeak
371
bigBed narrowPeak
238
tagAlign
214
fastq
35
bed broadPeak
28
bed bed3+
1
tagAlign bed3+
Organism
894
Homo sapiens
Biosample type
901
tissue
458
cell line
274
primary cell
181
in vitro differentiated cells
1
stem cell
Organ
209
brain
154
liver
123
heart
112
pancreas
74
connective tissue
73
adipose tissue
73
blood vessel
73
vasculature
66
limb
35
nerve
29
musculature of body
28
artery
27
kidney
20
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
899
AMP
2
T1D
Genome assembly (visualization)
584
GRCh38
523
hg19
Lab
861
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
26
missing controlled_by
Audit category:
inconsistent control read length
1
inconsistent assembly
assay_title!
total RNA-seq
audit.WARNING.category!
inconsistent control read length
month_released!
February, 2023
BIOSAMPLE
ASSAY
901 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
144
islet of Langerhans
71
left cardiac atrium
40
subcutaneous abdominal adipose tissue
36
heart left ventricle
35
+ See 103 more…
See all biosamples
Download