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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
Assay category
34
DNA binding
12
Transcription
3
3D chromatin structure
3
DNA accessibility
2
DNA methylation
Target of assay
25
control
13
histone
13
histone modification
9
narrow histone mark
broad histone mark
Date released
24
November, 2017
7
October, 2019
October, 2017
3
May, 2019
Available data
25
bam
24
tagAlign
4
bigWig
3
fastq
1
bed broadPeak
1
bed narrowPeak
Organism
34
Homo sapiens
Biosample type
31
tissue
3
primary cell
Organ
178
liver
52
pancreas
50
connective tissue
35
adipose tissue
34
brain
28
epithelium
23
vasculature
22
blood vessel
21
heart
19
limb
14
musculature of body
13
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
4
gonad
4
ovary
3
eye
3
vein
1
lymph node
Project
34
AMP
Genome assembly (visualization)
GRCh38
97
hg19
Lab
34
AMP-T2D consortium
assembly!
GRCh38
month_released!
October, 2017
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
tissue
cingulate gyrus
6
layer of hippocampus
4
substantia nigra
4
caudate nucleus
3
middle frontal area 46
3
+ See 9 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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