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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
Assay category
44
DNA binding
11
Transcription
Target of assay
histone
35
histone modification
32
control
20
broad histone mark
15
narrow histone mark
12
transcription factor
5
RNA binding protein
Date released
18
May, 2021
8
February, 2018
7
August, 2017
7
August, 2021
4
December, 2017
Available data
25
bam
17
fastq
10
tagAlign
Organism
44
Homo sapiens
Biosample type
188
tissue
76
cell line
44
in vitro differentiated cells
25
primary cell
Organ
7
connective tissue
6
embryo
4
epithelium
1
liver
1
pancreas
Project
44
AMP
Genome assembly (visualization)
42
GRCh38
hg19
Lab
27
AMP-T2D consortium
17
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
assembly!
hg19
organ_slims!
bone element
target.investigated_as!
histone
BIOSAMPLE
ASSAY
44 results
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ChIP-seq
in vitro differentiated cells
embryonic stem cell
18
adipocyte
7
neural progenitor cell
7
pancreatic endoderm
4
Hepatic endoderm
2
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