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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
182
Transcription
174
DNA accessibility
48
DNA methylation
32
DNA binding
1
3D chromatin structure
Target of assay
25
control
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
Date released
12
August, 2017
8
June, 2019
6
October, 2019
4
May, 2021
1
August, 2021
1
May, 2019
Available data
28
bam
12
fastq
1
tagAlign
Organism
32
Homo sapiens
Biosample type
297
tissue
79
in vitro differentiated cells
73
cell line
32
primary cell
Organ
22
epithelium
12
pancreas
5
blood vessel
5
vasculature
5
vein
3
connective tissue
3
kidney
2
heart
2
musculature of body
1
eye
1
liver
Project
32
AMP
Genome assembly (visualization)
hg19
151
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
assembly!
hg19
files.file_type!
bigBed narrowPeak
month_released!
October, 2018
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
5
cardiac fibroblast
2
epithelial cell of proximal tubule
2
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