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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
Assay category
44
DNA binding
28
DNA accessibility
26
Transcription
8
3D chromatin structure
6
DNA methylation
Target of assay
39
histone
39
histone modification
20
narrow histone mark
19
broad histone mark
5
transcription factor
4
RNA binding protein
Date released
18
October, 2019
11
November, 2019
4
June, 2019
4
May, 2019
3
August, 2021
3
May, 2021
1
March, 2020
Available data
101
bam
101
bigWig
97
bed narrowPeak
fastq
36
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
5
tagAlign
3
bed bed3+
Organism
44
Homo sapiens
Biosample type
29
primary cell
13
cell line
2
in vitro differentiated cells
Organ
108
brain
70
heart
69
blood vessel
69
vasculature
49
liver
48
limb
44
epithelium
44
pancreas
39
kidney
27
musculature of body
24
nerve
21
artery
12
vein
10
connective tissue
2
eye
1
adipose tissue
1
pituitary gland
Project
42
AMP
2
T1D
Genome assembly (visualization)
44
hg19
42
GRCh38
Lab
44
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
files.file_type!
fastq
month_released!
February, 2021
BIOSAMPLE
ASSAY
44 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
12
epithelial cell of proximal tubule
8
kidney epithelial cell
4
hepatocyte
3
retinal pigment epithelial cell
2
cell line
EndoC_BH1
13
in vitro differentiated cells
pancreatic PP cell
2
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