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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
184
ChIP-seq
Assay category
442
Transcription
243
DNA accessibility
184
DNA binding
47
DNA methylation
5
3D chromatin structure
1
DNA sequencing
Target of assay
172
histone
172
histone modification
95
broad histone mark
77
narrow histone mark
transcription factor
12
control
11
RNA binding protein
Date released
142
May, 2021
35
May, 2024
7
August, 2021
Available data
155
bigWig
152
bed narrowPeak
84
bam
84
tagAlign
Organism
184
Homo sapiens
Biosample type
117
primary cell
35
tissue
25
in vitro differentiated cells
7
cell line
Organ
35
heart
7
liver
Project
100
AMP
84
T1D
Genome assembly (visualization)
120
hg19
119
GRCh38
Lab
AMP-T2D consortium
142
Kyle Gaulton, UCSD
35
Patrick T. Ellinor, Broad
7
Bing Ren, UCSD
audit.ERROR.category!
audit script error
lab.title!
AMP-T2D consortium
organ_slims!
pericardium
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
184 results
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ChIP-seq
primary cell
monocyte
84
CD8-positive, alpha-beta T cell
33
tissue
left cardiac atrium
35
in vitro differentiated cells
embryonic stem cell
25
cell line
HepG2
7
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