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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
Assay category
180
Transcription
83
DNA binding
82
DNA accessibility
3
3D chromatin structure
1
DNA sequencing
Target of assay
55
histone
55
histone modification
29
broad histone mark
26
narrow histone mark
16
transcription factor
12
control
6
RNA binding protein
Date released
402
November, 2017
295
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
66
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
70
bed narrowPeak
70
bigWig
24
bam
24
tagAlign
3
bed bed3+
Organism
83
Homo sapiens
Biosample type
40
tissue
21
in vitro differentiated cells
18
cell line
4
primary cell
Organ
40
heart
22
liver
4
epithelium
Project
83
AMP
Genome assembly (visualization)
56
GRCh38
29
hg19
Lab
40
Patrick T. Ellinor, Broad
25
AMP-T2D consortium
18
Bing Ren, UCSD
audit.ERROR.category!
inconsistent replicate
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
83 results
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Clear Filters
ChIP-seq
tissue
left cardiac atrium
40
in vitro differentiated cells
neural progenitor cell
21
cell line
HepG2
18
primary cell
hepatocyte
4
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