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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
Assay category
45
Transcription
40
DNA binding
34
DNA accessibility
2
DNA methylation
1
3D chromatin structure
Target of assay
29
histone
29
histone modification
15
narrow histone mark
14
broad histone mark
7
control
4
RNA binding protein
4
transcription factor
Date released
22
June, 2019
13
November, 2019
October, 2019
3
May, 2019
1
March, 2020
1
May, 2021
Available data
40
bam
33
bed narrowPeak
33
bigWig
20
bigBed narrowPeak
Organism
40
Homo sapiens
Biosample type
25
primary cell
15
cell line
in vitro differentiated cells
Organ
21
epithelium
15
pancreas
11
connective tissue
8
musculature of body
6
kidney
4
heart
Project
38
AMP
2
T1D
Genome assembly (visualization)
33
GRCh38
33
hg19
Lab
40
AMP-T2D consortium
Audit category:
40
inconsistent ontology term
28
inconsistent control
biosample_type!
in vitro differentiated cells
month_released!
October, 2019
BIOSAMPLE
ASSAY
40 results
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ChIP-seq
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
4
epithelial cell of proximal tubule
3
kidney epithelial cell
3
cell line
EndoC_BH1
15
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