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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
Assay category
82
DNA binding
Target of assay
186
histone modification
185
histone
102
broad histone mark
82
narrow histone mark
50
control
45
transcription factor
6
RNA binding protein
2
chromatin remodeller
Date released
141
October, 2019
82
August, 2017
64
May, 2021
34
May, 2019
29
November, 2017
27
May, 2020
23
April, 2019
16
December, 2017
15
May, 2024
15
September, 2018
11
August, 2021
11
June, 2019
11
October, 2018
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
2
October, 2017
Available data
59
bigWig
51
bam
51
fastq
49
bed narrowPeak
29
tagAlign
15
bed broadPeak
11
bigBed narrowPeak
6
bed bed3+
bigBed broadPeak
Organism
80
Homo sapiens
Biosample type
50
tissue
16
in vitro differentiated cells
16
primary cell
Organ
34
pancreas
28
connective tissue
13
liver
12
adipose tissue
8
epithelium
7
musculature of body
Project
82
AMP
Genome assembly (visualization)
54
hg19
46
GRCh38
Lab
82
AMP-T2D consortium
Audit category:
11
missing controlled_by
Audit category:
7
inconsistent control read length
inconsistent assembly
1
inconsistent control run_type
audit.WARNING.category!
inconsistent assembly
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
82 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
14
liver
13
subcutaneous abdominal adipose tissue
11
skeletal muscle tissue
7
pancreas
4
+ See 1 more…
in vitro differentiated cells
adipocyte
16
primary cell
pancreatic endocrine cell
8
pancreatic alpha cell
4
pancreatic beta cell
4
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