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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
341
ChIP-seq
Assay category
341
DNA binding
Target of assay
234
transcription factor
77
histone
77
histone modification
71
control
65
recombinant protein
broad histone mark
33
narrow histone mark
32
RNA binding protein
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
341
November, 2017
187
October, 2019
174
August, 2017
89
May, 2021
December, 2017
65
November, 2018
62
May, 2019
54
October, 2018
50
May, 2020
43
April, 2019
34
August, 2021
34
December, 2018
23
June, 2019
21
January, 2019
20
May, 2024
15
February, 2018
15
September, 2018
8
February, 2021
7
November, 2019
6
September, 2017
5
October, 2017
3
March, 2020
Available data
331
bam
301
fastq
274
bigWig
254
bed narrowPeak
253
bigBed narrowPeak
53
bed broadPeak
49
bigBed broadPeak
32
tagAlign
3
tar
Organism
341
Homo sapiens
Biosample type
292
cell line
40
tissue
9
primary cell
Organ
292
liver
49
brain
6
epithelium
6
vasculature
3
blood vessel
Project
341
AMP
Genome assembly (visualization)
256
hg19
223
GRCh38
Lab
341
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
month_released!
December, 2017
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
341 results
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Clear Filters
ChIP-seq
cell line
HepG2
292
tissue
layer of hippocampus
10
caudate nucleus
7
cingulate gyrus
7
middle frontal area 46
7
substantia nigra
7
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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