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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
Assay category
90
DNA binding
28
DNA accessibility
21
Transcription
6
DNA methylation
2
3D chromatin structure
Target of assay
85
histone modification
histone
51
narrow histone mark
48
control
41
transcription factor
33
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
46
December, 2017
23
May, 2020
16
August, 2017
4
November, 2018
1
August, 2021
Available data
87
bam
63
fastq
42
bed narrowPeak
42
bigWig
37
bigBed narrowPeak
27
tagAlign
3
bed bed3+
Organism
90
Homo sapiens
Biosample type
cell line
86
tissue
3
in vitro differentiated cells
1
primary cell
Organ
90
liver
75
connective tissue
58
pancreas
41
adipose tissue
33
epithelium
31
brain
31
heart
25
vasculature
23
blood vessel
17
limb
14
spleen
12
kidney
11
nerve
10
embryo
8
artery
6
musculature of body
2
eye
2
vein
Project
90
AMP
Genome assembly (visualization)
43
GRCh38
43
hg19
Lab
90
AMP-T2D consortium
Audit category:
27
inconsistent control
biosample_type!
cell line
files.file_type!
tsv
target.investigated_as!
histone
BIOSAMPLE
ASSAY
90 results
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Clear Filters
ChIP-seq
tissue
liver
81
right lobe of liver
5
in vitro differentiated cells
hepatocyte
3
primary cell
hepatocyte
1
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